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Click to enlargepadPhytophthora:  Identifying Species by Morphology and DNA Fingerprints

Phytophthora

NEW!

 

“This book will be throughout the world an excellent resource for these who are interested in identifying Phytophthora species.”

-- Dr. Theo Wetzel, Archives of Phytopathology & Plant Protection

 

By Mannon E. Gallegly and Chuanxue Hong

 

The genus Phytophthora, known as the “plant destroyer”, is one of the most important group of disease causing organisms. This genus contains the potato blight pathogen, Phytophthora infestans, and the sudden oak death pathogen, Phytophthora ramorum. Currently the latter species is classified as invasive, and a second one, Phytophthora kernoviae, is about to be placed in this category. Intensive surveys for the presence of these new potentially deadly pathogens have been underway and will continue with funding to search for the second invasive species. Whether or not additional new species with potential destructiveness are found, there are older known species which can erupt at any time and severely damage our crop plants. Correctly identifying them to species level is the first critical step in mitigating crop health risk locally and ensuring plant biosecurity globally.

 

The new identification key, Phytophthora: Identifying Species by Morphology and DNA Fingerprints, enables diagnosticians and regulatory personnel as well as researchers to identify Phytophthora species with speed and confidence. There were only about 50 identified species when the last key was published in 1990, but now that species number is approaching 100. In addition, there have been tremendous efforts in search of a reliable, high-resolution molecular character for rapid identification. This book presents a new key, integrating the classical morphological approach and a new DNA fingerprinting technique called PCR-SSCP. The dichotomous key uses minimal morphological characters, followed by pictorial illustrations. The DNA fingerprint key uses only the rDNA-ITS region amplified with a single pair of primers; a detailed step-by-step fingerprinting protocol is provided.

 

A total of 652 original photos are included to illustrate individual species covered as well as a partial list of other molecular characters used for description of new species and differentiation of existing species in recent years. This book will be an excellent resource for those who are interested in identifying Phytophthora species. Sixty of the important species and taxons are presented in the book. Also, the framework of the identification keys in the book will readily accept the introduction of additional species as they are studied and described.

 

Each species is presented on its own two-page section

Each section includes a description, PCR-SSCP fingerprint key, and illustrations for morphological characters. To view the pages below in full size, click on the image.


 

 

Features and Benefits of the NEW Phytophthora Identification Key

 

Integration of classical approach and modern DNA finger printing technology - This enables students, teaches, diagnosticians, and researchers to correctly identify Phytophthora; they can use one method to identify and another to confirm isolate identities. Plus, it allows those who are skilled in DNA fingerprinting techniques to learn the classical approach and visa versa.

 

New dichotomous-like key is presented using minimal morphological characters and the DNA fingerprint key uses only the rDNA-ITS region amplified with a single pair of universal primers - This enables plant health regulatory personnel and diagnosticians to quickly identify Phytophthora species.

 

Pictorial illustrations of morphological characters used in the key and description of individual species - This helps beginners to understand and master essential taxonomic terms and diagnostic characters of individual species. It will also bring them up to speed in their new research and diagnostic service positions.

 

Step by step procedures are provided for all methods used in development of both keys - This allows key users to easily become adept in species identification.

 

Provides a PCR-SSCP fingerprint key along with the protocol of how to use it - This DNA fingerprint technique is quicker and can be used as a confirmation of the morphological identification. Diagnosticians and beginning students can easily become proficient using this method with the straightforward protocol.

 

About the Authors

 

Mannon Gallegly has nearly 60 years of experience researching the taxonomy of this important genus. He began his studies of Phytophthora infestans in 1950 and over the years gradually expanded his studies to include other species. He continues these studies as an Emeritus Professor at West Virginia University emphasizing classical morphology.

 

Chuanxue Hong began his studies of Phytophthora in 1999, and has since made this genus the central theme of his research program with molecular diagnostics as a major focus. His laboratory developed the PCR-SSCP fingerprint procedure which has empowered his other research and diagnostic service including SOD surveys at ornamental nurseries, surrounding forests and waterways.

 




Contents

Chapter 1: The Morphological Key
    Appendixes: 1. General procedures for morphological identification
                       2. Illustrations of definitive morphological characters
                       3. Growth media and methods

Chapter 2: The DNA Fingerprint Key
    Appendixes: 1. The PCR-SSCP protocol
                       2. A partial list of other molecular fingerprinting techniques 

Chapter 3: Morphological Characters and DNA Fingerprints of Individual Species
   
Phytophthora alni
    Phytophthora boehmeriae
    Phytophthora botryosa
    Phytophthora cactorum
    Phytophthora cajani
    Phytophthora cambivora
    Phytophthora capsici
    Phytophthora cinnamomi
var. cinnamomi
    Phytophthora cinnamomi
var. parvispora
    Phytophthora citricola
I
    Phytophthora citricola
II
    Phytophthora citricola
III
    Phytophthora citrophthora
    Phytophthora clandestina
    Phytophthora colocasiae
    Phytophthora cryptogrea
    Phytophthora drechsleri
    Phytophthora erythroseptica
    Phytophthora europaea
    Phytophthora fragariae
    Phytophthora hedraiandra
    Phytophthora heveae
    Phytophthora hibernalis
    Phytophthora humicola
    Phytophthora idaei
    Phytophthora ilicis
    Phytophthora infestans
    Phytophthora insolita
    Phytophthora inundata
    Phytophthora iranica 
    Phytophthora katsurae
    Phytophthora lateralis
    Phytophthora meadii
    Phytophthora medicaginis
    Phytophthora megakarya
    Phytophthora megasperma
I
    Phytophthora megasperma
II
    Phytophthora megasperma
III
    Phytophthora melonis
    Phytophthora mexicana
    Phytophthora mirabilis
    Phytophthora nemorosa
    Phytophthora nicotianae
    Phytophthora palmivora
    Phytophthora phaseoli
    Phytophthora pistaciae
    Phytophthora porri
    Phytophthora primulae
    Phytophthora pseudosyringae
    Phytophthora pseudotsugae
    Phytophthora pshychrophila
    Phytophthora quercina
    Phytophthora ramorum
    Phytophthora rubi
    Phytophthora sojae
    Phytophthora syringae
    Phytophthora tentaculata
    Phytophthora trifolii
    Phytophthora tropicalis
   
Appendix: Host, geographic origin, provider, and culture deposits of key isolates

Glossary
Literature Cited
Index


2008; 8.5" x 11" softcover spiral bound; 168 pages; 130 black and white images; (2 pounds);
ISBN 978-0-89054-364-1; Item No. 43641


43641pad$79.00pad
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